STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY74459.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (141 aa)    
Predicted Functional Partners:
OGY74461.1
F0F1 ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.820
OGY74460.1
ATP synthase F1 subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.811
OGY76844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.637
OGY76553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.553
OGY76400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.550
OGY76823.1
Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.550
OGY74462.1
ATP synthase F1 subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.545
OGY75747.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.527
OGY74458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.469
OGY74463.1
F0F1 ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.452
Your Current Organism:
Jacksonbacteria bacterium RIFOXYA2FULL4312
NCBI taxonomy Id: 1798462
Other names: C. Jacksonbacteria bacterium RIFOXYA2_FULL_43_12, Candidatus Jacksonbacteria bacterium RIFOXYA2_FULL_43_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.