STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY74718.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
OGY74717.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.993
OGY74723.1
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.973
OGY74716.1
3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.948
OGY74755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
  0.853
OGY76146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.850
OGY74713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.766
OGY76844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.706
OGY76828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.703
OGY76188.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.700
OGY74719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
Your Current Organism:
Jacksonbacteria bacterium RIFOXYA2FULL4312
NCBI taxonomy Id: 1798462
Other names: C. Jacksonbacteria bacterium RIFOXYA2_FULL_43_12, Candidatus Jacksonbacteria bacterium RIFOXYA2_FULL_43_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.