STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGG42937.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (404 aa)    
Predicted Functional Partners:
OGG42936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.888
OGG43380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.789
OGG43918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.775
OGG43382.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.661
OGG43384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.642
OGG43359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.630
OGG42938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
OGG42939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.548
OGG43497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.492
OGG43593.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.440
Your Current Organism:
Jorgensenbacteria bacterium RIFCSPLOWO212FULL4211
NCBI taxonomy Id: 1798473
Other names: C. Jorgensenbacteria bacterium RIFCSPLOWO2_12_FULL_42_11, Candidatus Jorgensenbacteria bacterium RIFCSPLOWO2_12_FULL_42_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.