STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGG50755.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (178 aa)    
Predicted Functional Partners:
OGG50777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.969
OGG50756.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.959
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
  0.918
OGG50314.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
 
 0.848
OGG49659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.842
A2763_04150
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
    
 0.836
OGG50757.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.811
OGG50880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.805
OGG50536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.804
OGG50939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.802
Your Current Organism:
Kaiserbacteria bacterium RIFCSPHIGHO201FULL5436
NCBI taxonomy Id: 1798482
Other names: C. Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36, Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_54_36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.