STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY79829.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (311 aa)    
Predicted Functional Partners:
OGY78804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.710
OGY78948.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.654
OGY79828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.545
OGY79120.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.505
OGY78631.1
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.487
OGY80023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.478
Your Current Organism:
Kerfeldbacteria bacterium RIFCSPHIGHO202FULL4214
NCBI taxonomy Id: 1798540
Other names: C. Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14, Candidatus Kerfeldbacteria bacterium RIFCSPHIGHO2_02_FULL_42_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.