STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGG87085.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)    
Predicted Functional Partners:
OGG87031.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.644
OGG87047.1
Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.630
OGG87084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.561
OGG87083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.518
OGG87086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.483
pheT
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.475
A3B87_03700
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
polA
DNA methylase N-4; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.420
OGG87180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.406
nusB
Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
  
 0.403
Your Current Organism:
Kuenenbacteria bacterium RIFCSPHIGHO202FULL3913
NCBI taxonomy Id: 1798561
Other names: C. Kuenenbacteria bacterium RIFCSPHIGHO2_02_FULL_39_13, Candidatus Kuenenbacteria bacterium RIFCSPHIGHO2_02_FULL_39_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.