Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OGV28087.1 | OGV28088.1 | A3E88_05365 | A3E88_05370 | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.955 |
| OGV28087.1 | OGV35379.1 | A3E88_05365 | A3E88_07470 | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.664 |
| OGV28087.1 | hemC | A3E88_05365 | A3E88_05360 | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.993 |
| OGV28087.1 | hemE | A3E88_05365 | A3E88_03005 | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.831 |
| OGV28087.1 | hemH | A3E88_05365 | A3E88_05665 | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Thiamine biosynthesis protein ThiF; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.451 |
| OGV28088.1 | OGV28087.1 | A3E88_05370 | A3E88_05365 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.955 |
| OGV28088.1 | hemC | A3E88_05370 | A3E88_05360 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.956 |
| OGV28088.1 | hemE | A3E88_05370 | A3E88_03005 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.724 |
| OGV30523.1 | hemE | A3E88_01800 | A3E88_03005 | Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.625 |
| OGV31411.1 | bioB | A3E88_03000 | A3E88_00505 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.700 |
| OGV31411.1 | hemE | A3E88_03000 | A3E88_03005 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.875 |
| OGV35379.1 | OGV28087.1 | A3E88_07470 | A3E88_05365 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.664 |
| OGV35379.1 | hemC | A3E88_07470 | A3E88_05360 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.747 |
| OGV35379.1 | hemE | A3E88_07470 | A3E88_03005 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.718 |
| OGV36309.1 | hemE | A3E88_04440 | A3E88_03005 | Delta(24(24(1)))-sterol reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.653 |
| OGV37271.1 | hemE | A3E88_06250 | A3E88_03005 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.710 |
| bioB | OGV31411.1 | A3E88_00505 | A3E88_03000 | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.700 |
| bioB | hemE | A3E88_00505 | A3E88_03005 | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.725 |
| hemC | OGV28087.1 | A3E88_05360 | A3E88_05365 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.993 |
| hemC | OGV28088.1 | A3E88_05360 | A3E88_05370 | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.956 |
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