STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV32571.1RelB/DinJ family addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
OGV35726.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.627
A3E88_06195
Cell filamentation protein Fic; Metagenomic; derived from metagenome: subsurface metagenome.
  
 
 0.627
OGV34093.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.615
OGV37940.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.615
Your Current Organism:
Legionellales bacterium RIFCSPHIGHO212FULL3511
NCBI taxonomy Id: 1798567
Other names: L. bacterium RIFCSPHIGHO2_12_FULL_35_11, Legionellales bacterium RIFCSPHIGHO2_12_FULL_35_11
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