STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV18638.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
OGV18672.1
Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
OGV17879.1
Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
OGV19635.1
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.897
OGV18521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.835
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.812
OGV21109.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.481
OGV19201.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.455
OGV19207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.455
OGV18969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.455
OGV18023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial secretin family.
    
   0.455
Your Current Organism:
Lentisphaerae bacterium GWF23869
NCBI taxonomy Id: 1798570
Other names: L. bacterium GWF2_38_69, Lentisphaerae bacterium GWF2_38_69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.