STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV21560.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
OGV21559.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
OGV18459.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
  
  0.615
OGV21829.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
  
  0.564
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
  0.553
OGV21657.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.545
OGV18505.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.492
OGV21561.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.419
OGV21602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
Your Current Organism:
Lentisphaerae bacterium GWF23869
NCBI taxonomy Id: 1798570
Other names: L. bacterium GWF2_38_69, Lentisphaerae bacterium GWF2_38_69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.