STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV54418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (220 aa)    
Predicted Functional Partners:
OGV54417.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
OGV54419.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGV54416.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
OGV44680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.695
OGV54415.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
OGV54414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.637
OGV51625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.614
OGV48609.1
Cyclic beta 1-2 glucan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.610
OGV52518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.577
OGV54420.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.556
Your Current Organism:
Lentisphaerae bacterium GWF24416
NCBI taxonomy Id: 1798571
Other names: L. bacterium GWF2_44_16, Lentisphaerae bacterium GWF2_44_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.