STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV55847.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1128 aa)    
Predicted Functional Partners:
OGV55848.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.828
A2017_18380
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.765
OGV50053.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.762
OGV55843.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.696
OGV47958.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.684
OGV51744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.664
OGV53563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.641
OGV55845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.629
OGV55846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.621
A2017_20605
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
  
 
 0.601
Your Current Organism:
Lentisphaerae bacterium GWF24416
NCBI taxonomy Id: 1798571
Other names: L. bacterium GWF2_44_16, Lentisphaerae bacterium GWF2_44_16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.