STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH24955.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)    
Predicted Functional Partners:
OGH24939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
OGH24937.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
OGH24954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
OGH24956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.405
Your Current Organism:
Levybacteria bacterium RIFCSPHIGHO201FULL4016
NCBI taxonomy Id: 1798595
Other names: C. Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_16, Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_16
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