STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJF98797.1Exodeoxyribonuclease VII small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)    
Predicted Functional Partners:
OJF95010.1
Exodeoxyribonuclease VII large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OJF98796.1
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
OJF99812.1
Porphobilinogen deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.680
OJF96107.1
Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.541
OJG00613.1
Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.533
ispDF
Bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.520
OJF98798.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
OJF89941.1
Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.458
OJF93886.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.456
OJF98795.1
BioY family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
Your Current Organism:
Pararhizobium antarcticum
NCBI taxonomy Id: 1798805
Other names: DSM 103442, LMG 29675, LMG:29675, P. antarcticum, Pararhizobium antarcticum Naqvi et al. 2017, Rhizobium sp. 59, strain NAQVI 59
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