STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AX760_17570Sodium:alanine symporter; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)    
Predicted Functional Partners:
OJF92951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.925
OJF99414.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.915
OJF97794.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.915
OJG00964.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.846
OJF93470.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.843
OJF93787.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.843
OJF92826.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.843
OJF98731.1
Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.841
OJF98881.1
Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.841
OJF98032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.827
Your Current Organism:
Pararhizobium antarcticum
NCBI taxonomy Id: 1798805
Other names: DSM 103442, LMG 29675, LMG:29675, P. antarcticum, Pararhizobium antarcticum Naqvi et al. 2017, Rhizobium sp. 59, strain NAQVI 59
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