STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI27199.1NdvB protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (792 aa)    
Predicted Functional Partners:
KXI27126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.923
KXI27127.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.756
KXI27746.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.755
KXI26741.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.712
KXI28163.1
Together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.687
KXI28782.1
Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.686
KXI28783.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.682
KXI27078.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.677
KXI28732.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.672
KXI27747.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.653
Your Current Organism:
Paraglaciecola hydrolytica
NCBI taxonomy Id: 1799789
Other names: DSM 102834, LMG 29457, LMG:29457, NCIMB 15060, P. hydrolytica, Paraglaciecola hydrolytica Bech et al. 2017, Paraglaciecola sp. S66, strain S66
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