STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI30253.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (349 aa)    
Predicted Functional Partners:
KXI30252.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.971
KXI27029.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.890
KXI30736.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.881
KXI27002.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.877
KXI28294.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.877
KXI30184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.833
KXI30254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.809
KXI27098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.653
KXI30251.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.415
deaD
RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
       0.413
Your Current Organism:
Paraglaciecola hydrolytica
NCBI taxonomy Id: 1799789
Other names: DSM 102834, LMG 29457, LMG:29457, NCIMB 15060, P. hydrolytica, Paraglaciecola hydrolytica Bech et al. 2017, Paraglaciecola sp. S66, strain S66
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.