STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI28802.1Peptidylglycine monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)    
Predicted Functional Partners:
KXI29391.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
KXI26970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
KXI26889.1
Cytochrome c, diheme subunit of cytochrome bc complex peta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.944
gltB
Glutamate synthase large subunit; Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.924
KXI30170.1
Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.907
KXI30641.1
Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
KXI29110.1
Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
KXI27006.1
Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.887
KXI30642.1
Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.887
KXI30339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.862
Your Current Organism:
Paraglaciecola hydrolytica
NCBI taxonomy Id: 1799789
Other names: DSM 102834, LMG 29457, LMG:29457, NCIMB 15060, P. hydrolytica, Paraglaciecola hydrolytica Bech et al. 2017, Paraglaciecola sp. S66, strain S66
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