STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI28808.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
KXI30093.1
Carbamoyl-phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.917
KXI28823.1
Agarase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
KXI28825.1
Agarase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.684
KXI28812.1
Agarase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.681
KXI28840.1
Agarase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
KXI27116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.657
KXI28881.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
KXI28811.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.638
KXI27115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.636
KXI28847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.636
Your Current Organism:
Paraglaciecola hydrolytica
NCBI taxonomy Id: 1799789
Other names: DSM 102834, LMG 29457, LMG:29457, NCIMB 15060, P. hydrolytica, Paraglaciecola hydrolytica Bech et al. 2017, Paraglaciecola sp. S66, strain S66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.