STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXI27900.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)    
Predicted Functional Partners:
KXI27902.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting); Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
KXI27899.1
Flagellar protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
KXI27901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KXI27898.1
Flagellar hook protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.667
KXI28024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.612
KXI27904.1
Pseudaminic acid cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.411
KXI27905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.411
KXI27906.1
Pseudaminic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.411
AX660_20565
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.405
Your Current Organism:
Paraglaciecola hydrolytica
NCBI taxonomy Id: 1799789
Other names: DSM 102834, LMG 29457, LMG:29457, NCIMB 15060, P. hydrolytica, Paraglaciecola hydrolytica Bech et al. 2017, Paraglaciecola sp. S66, strain S66
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