STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_01088RING-type domain-containing protein. (576 aa)    
Predicted Functional Partners:
AZE42_02395
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.712
AZE42_03498
Uncharacterized protein.
    
  0.693
AZE42_12741
Ubiquitin-like domain-containing protein.
   
  0.692
AZE42_09322
Uncharacterized protein.
   
  0.692
AZE42_06909
Ubiquitin-like domain-containing protein.
    
  0.691
AZE42_04128
Ubiquitin-like domain-containing protein.
    
  0.691
AZE42_00533
Uncharacterized protein.
    
  0.672
AZE42_00532
Uncharacterized protein.
    
  0.672
AZE42_06068
RBR-type E3 ubiquitin transferase.
  
 
0.657
AZE42_08733
RBR-type E3 ubiquitin transferase.
  
 
0.654
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.