STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_05185Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (1042 aa)    
Predicted Functional Partners:
AZE42_00350
Ribosomal_L18_c domain-containing protein.
  
 
 0.940
AZE42_00630
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.937
AZE42_01400
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.936
AZE42_06981
KOW domain-containing protein.
  
   0.932
AZE42_03294
Ribosomal_L23eN domain-containing protein.
  
 
 0.928
AZE42_01270
KH type-2 domain-containing protein.
  
 
 0.920
AZE42_04179
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.905
AZE42_01042
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.899
AZE42_00094
Uncharacterized protein.
  
 
 0.892
AZE42_10485
Uncharacterized protein.
  
 
 0.882
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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