STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_13161CCHC-type domain-containing protein. (239 aa)    
Predicted Functional Partners:
AZE42_07002
Uncharacterized protein.
    
 0.678
AZE42_08086
WD_REPEATS_REGION domain-containing protein.
    
 0.601
AZE42_04345
ERCC4 domain-containing protein.
    
  0.580
AZE42_02561
Uncharacterized protein.
    
  0.525
AZE42_05119
Uncharacterized protein.
    
 0.523
AZE42_05120
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.523
AZE42_02780
Uncharacterized protein.
    
  0.497
AZE42_10425
Uncharacterized protein.
    
  0.497
AZE42_04457
Uncharacterized protein.
    
  0.497
AZE42_08589
Uncharacterized protein.
    
 0.472
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.