STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_12861Uncharacterized protein. (39 aa)    
Predicted Functional Partners:
AZE42_00500
Diphthami_syn_2 domain-containing protein.
    
 0.977
AZE42_01934
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.950
AZE42_09629
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.946
AZE42_01270
KH type-2 domain-containing protein.
  
 0.946
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.943
AZE42_02835
Ribos_L4_asso_C domain-containing protein.
  
 0.943
AZE42_00755
Ribosomal_L2_C domain-containing protein.
  
 0.943
AZE42_07000
Ribosomal_L7Ae domain-containing protein.
  
 0.940
AZE42_00630
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.937
AZE42_01400
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.937
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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