STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_04456TP6A_N domain-containing protein. (628 aa)    
Predicted Functional Partners:
AZE42_08812
WD_REPEATS_REGION domain-containing protein.
    
 
 0.862
RAD51
RAD51 protein; Belongs to the RecA family.
    
 0.811
AZE42_00650
WD_REPEATS_REGION domain-containing protein; Belongs to the MRE11/RAD32 family.
   
 0.776
AZE42_03080
Uncharacterized protein.
    
 0.775
AZE42_00143
Uncharacterized protein; Belongs to the RecA family.
    
 0.771
AZE42_04751
RECA_2 domain-containing protein.
    
 0.730
AZE42_02359
RECA_2 domain-containing protein.
    
 0.707
AZE42_02130
RECA_2 domain-containing protein.
    
 0.707
AZE42_04345
ERCC4 domain-containing protein.
    
 
 0.704
AZE42_05106
Rad21_Rec8 domain-containing protein.
    
 
 0.697
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.