STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_00928Uncharacterized protein. (732 aa)    
Predicted Functional Partners:
AZE42_04852
Uncharacterized protein.
    
 0.977
AZE42_01062
DNA_LIGASE_A3 domain-containing protein.
    
 0.811
AZE42_07151
VWFA domain-containing protein.
    
 0.810
AZE42_03775
SAP domain-containing protein.
    
 0.766
AZE42_01894
DNA ligase.
    
 0.677
AZE42_05325
DNA ligase.
    
 0.677
AZE42_01151
Serine/threonine-protein kinase TOR.
    
 0.675
AZE42_02345
Uncharacterized protein.
    
 0.675
AZE42_06820
Protein kinase domain-containing protein.
    
 0.581
AZE42_07351
Protein kinase domain-containing protein.
    
 0.581
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.