STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_02415Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
AZE42_01863
Uncharacterized protein.
   
 0.671
AZE42_03700
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.638
AZE42_02265
FSH1 domain-containing protein.
   
 
 0.586
AZE42_00231
ULP_PROTEASE domain-containing protein.
    
 
 0.585
AZE42_05329
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.526
AZE42_05101
ACB domain-containing protein.
    
 0.517
AZE42_02395
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.515
AZE42_00194
BUD22 domain-containing protein.
   
 
 0.509
AZE42_08628
Cytochrome b5 heme-binding domain-containing protein.
   
 0.507
AZE42_10219
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.507
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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