STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_02559Uncharacterized protein. (822 aa)    
Predicted Functional Partners:
AZE42_00945
RRM domain-containing protein.
    
 
 0.761
AZE42_02115
Uncharacterized protein.
    
 
 0.702
AZE42_02433
Uncharacterized protein.
   
 
 0.666
AZE42_05259
YTH domain-containing protein.
    
 
 0.664
AZE42_10471
Uncharacterized protein.
   
 
 0.641
SKI2
Cytoplasmic exosomal RNA helicase.
   
 
 0.488
AZE42_02538
RNA helicase.
    
 
 0.412
AZE42_00748
Uncharacterized protein.
   
 
 0.408
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.