STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_00059Ima1_N domain-containing protein. (518 aa)    
Predicted Functional Partners:
AZE42_01679
Uncharacterized protein.
    
 
 0.587
AZE42_01956
SUN domain-containing protein.
    
 
 0.554
AZE42_02602
SUN domain-containing protein.
    
 
 0.554
AZE42_09833
Uncharacterized protein.
    
 
 0.508
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.