STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_12793COesterase domain-containing protein. (188 aa)    
Predicted Functional Partners:
AZE42_11600
Uncharacterized protein.
 
  
  0.857
AZE42_06996
Uncharacterized protein.
    
 0.803
AZE42_02608
Uncharacterized protein.
    
 0.803
AZE42_09486
Uncharacterized protein.
    
 0.803
AZE42_08209
DRIM domain-containing protein.
   
 0.795
AZE42_00906
Utp12 domain-containing protein.
   
 0.776
AZE42_05351
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.771
AZE42_03678
CRAL-TRIO domain-containing protein.
   
  0.764
AZE42_01286
Sas10 domain-containing protein.
    
  0.763
AZE42_11346
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.763
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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