STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_08304ABC transporter domain-containing protein. (95 aa)    
Predicted Functional Partners:
AZE42_13546
ABC transporter domain-containing protein.
 
     0.908
AZE42_12735
ABC transmembrane type-1 domain-containing protein.
 
      0.898
AZE42_04576
ABC transporter domain-containing protein.
 
     0.888
AZE42_10764
ABC transporter domain-containing protein.
 
     0.887
AZE42_02552
Uncharacterized protein.
 
     0.866
AZE42_08496
ABC transporter domain-containing protein.
 
     0.844
AZE42_10763
Uncharacterized protein.
 
      0.834
AZE42_12733
ABC transmembrane type-1 domain-containing protein.
 
      0.760
AZE42_12747
ABC transmembrane type-1 domain-containing protein.
 
      0.755
AZE42_08305
ABC transmembrane type-1 domain-containing protein.
 
      0.730
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.