STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_11957RPN6_C_helix domain-containing protein. (184 aa)    
Predicted Functional Partners:
AZE42_00033
PCI domain-containing protein.
   
 0.980
AZE42_00486
MPN domain-containing protein.
   
 0.980
AZE42_02721
MPN domain-containing protein.
   
 0.978
AZE42_00110
IBB domain-containing protein.
   
 0.976
AZE42_09981
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.975
AZE42_01416
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.975
AZE42_09871
Proteasome subunit alpha type.
   
 0.975
AZE42_06401
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.972
26S_PRC
26S proteasome regulatory complex protein.
   
 0.971
AZE42_09291
Proteasome subunit alpha type.
   
 0.971
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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