STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_07268CPSF_A domain-containing protein. (1430 aa)    
Predicted Functional Partners:
AZE42_03126
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.988
AZE42_03871
Uncharacterized protein.
   
 0.987
AZE42_00270
Uncharacterized protein.
   
 0.986
AZE42_12761
WD_REPEATS_REGION domain-containing protein.
    
 0.986
AZE42_06007
Uncharacterized protein.
    
 0.986
AZE42_08089
Fip1 domain-containing protein.
   
 0.985
AZE42_04668
Uncharacterized protein.
    
 0.983
AZE42_05907
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.982
AZE42_01046
Uncharacterized protein.
    
 0.977
AZE42_07859
Uncharacterized protein.
    
 0.976
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.