STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_04139Uncharacterized protein. (587 aa)    
Predicted Functional Partners:
AZE42_02512
Uncharacterized protein.
    
 0.895
AZE42_12741
Ubiquitin-like domain-containing protein.
    
 0.894
AZE42_09322
Uncharacterized protein.
    
 0.894
AZE42_02470
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.889
AZE42_03235
ENTH domain-containing protein.
    
 0.883
AZE42_06641
Protein kinase domain-containing protein.
    
 0.882
AZE42_05515
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.879
AZE42_09015
Uncharacterized protein.
   
 0.878
AZE42_02693
Serine/threonine-protein kinase.
   
 0.878
AZE42_04415
VHS domain-containing protein.
    
 0.878
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.