STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_00300Uncharacterized protein. (2269 aa)    
Predicted Functional Partners:
AZE42_06996
Uncharacterized protein.
   
 0.919
AZE42_02608
Uncharacterized protein.
   
 0.919
AZE42_09486
Uncharacterized protein.
   
0.919
AZE42_00314
FAD-binding PCMH-type domain-containing protein.
  
 0.907
AZE42_03491
FAD-binding PCMH-type domain-containing protein.
  
 0.906
AZE42_02025
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 
 0.884
AZE42_09150
BBE domain-containing protein.
  
 0.873
AZE42_00316
FAD-binding PCMH-type domain-containing protein.
  
 0.873
AZE42_09149
BBE domain-containing protein.
  
 0.873
AZE42_02310
PIH1 domain-containing protein.
  
 0.873
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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