STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_06181Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
AZE42_00332
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
   0.767
AZE42_04540
Uncharacterized protein.
   
   0.759
AZE42_07838
Uncharacterized protein.
    
 0.733
AZE42_03991
DNA polymerase.
   
 0.726
AZE42_05922
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.725
AZE42_03966
Uncharacterized protein.
   
   0.721
AZE42_01738
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
   0.718
AZE42_07071
Uncharacterized protein; Belongs to the complex I LYR family.
   
   0.711
AZE42_05112
zf-CHCC domain-containing protein.
   
   0.709
AZE42_00952
Sm domain-containing protein.
    
  0.709
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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