STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_08594WD_REPEATS_REGION domain-containing protein. (566 aa)    
Predicted Functional Partners:
AZE42_02334
Uncharacterized protein.
   
 
 0.958
AZE42_07991
Brix domain-containing protein.
   
 
 0.956
AZE42_07490
Brix domain-containing protein.
   
 
 0.953
AZE42_06836
Uncharacterized protein.
   
 
 0.952
AZE42_04026
RRM domain-containing protein.
   
 
 0.945
AZE42_03494
Uncharacterized protein.
   
 
 0.940
AZE42_03821
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.923
AZE42_00019
WD_REPEATS_REGION domain-containing protein.
   
  
 0.921
AZE42_01889
Uncharacterized protein.
   
    0.920
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.918
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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