STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_03768ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. (1154 aa)    
Predicted Functional Partners:
AZE42_00114
CoA_binding domain-containing protein; Belongs to the succinate/malate CoA ligase alpha subunit family.
  
0.997
AZE42_02288
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
AZE42_07904
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
AZE42_13883
Citrate synthase; Belongs to the citrate synthase family.
  
 0.977
AZE42_13187
Citrate synthase; Belongs to the citrate synthase family.
  
 0.977
AZE42_05064
Uncharacterized protein.
  
 0.974
AZE42_11597
Malate dehydrogenase.
  
 0.974
AZE42_07359
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.962
AZE42_02958
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.961
AZE42_10487
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.960
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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