STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_06299Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
AZE42_03301
Uncharacterized protein.
   
 
 0.939
AZE42_01127
OBG-type G domain-containing protein.
   
 
 0.898
AZE42_05350
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.891
AZE42_01270
KH type-2 domain-containing protein.
   
 
 0.889
AZE42_01042
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.886
AZE42_09629
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.882
AZE42_02388
Ribosomal_S10 domain-containing protein.
   
   0.878
AZE42_02822
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.871
AZE42_02063
S10_plectin domain-containing protein.
   
 
 0.868
AZE42_00350
Ribosomal_L18_c domain-containing protein.
   
 
 0.868
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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