STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_04749Autophagy-related protein. (123 aa)    
Predicted Functional Partners:
AZE42_05181
Uncharacterized protein.
   
 0.999
AZE42_02431
Uncharacterized protein.
   
 0.999
AZE42_10148
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy.
   
 0.998
AZE42_02020
Autophagy-related protein 3.
  
 0.995
AZE42_01606
Uncharacterized protein.
   
 0.979
AZE42_12836
Uncharacterized protein.
   
 0.967
AZE42_12837
Uncharacterized protein.
   
 0.967
AZE42_11385
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.967
AZE42_03245
Uncharacterized protein.
   
 0.964
AZE42_08554
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
   
 0.962
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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