STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_03927WD_REPEATS_REGION domain-containing protein. (261 aa)    
Predicted Functional Partners:
AZE42_03480
Uncharacterized protein.
    
 0.754
AZE42_02944
B30.2/SPRY domain-containing protein.
    
 0.753
AZE42_01197
Uncharacterized protein.
    
 0.746
AZE42_00710
Uncharacterized protein.
    
 0.710
AZE42_04563
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.695
AZE42_04917
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.683
AZE42_03589
Uncharacterized protein.
   
 0.682
AZE42_06043
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.657
AZE42_08098
Histone H2A; Belongs to the histone H2A family.
   
 0.634
AZE42_10801
Uncharacterized protein.
  
 
  0.631
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.