STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_08057EMC1_C domain-containing protein. (634 aa)    
Predicted Functional Partners:
AZE42_07137
TPR_REGION domain-containing protein.
   
 0.934
AZE42_12686
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
 
 0.899
AZE42_00556
Uncharacterized protein.
    
 
 0.899
AZE42_04175
Uncharacterized protein.
    
 
 0.892
AZE42_06691
DUF2012 domain-containing protein.
    
 
 0.885
AZE42_05273
Uncharacterized protein.
    
 
 0.885
AZE42_04866
Uncharacterized protein.
    
 
 0.858
AZE42_01083
CUE domain-containing protein.
    
 
 0.556
AZE42_08625
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
 
 0.542
AZE42_05665
Plug_translocon domain-containing protein.
   
 
 0.533
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.