STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_08573Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
AZE42_07729
Uncharacterized protein.
   
 0.991
AZE42_02542
WD_REPEATS_REGION domain-containing protein.
   
 0.989
AZE42_03289
Bms1-type G domain-containing protein.
   
 0.987
AZE42_00906
Utp12 domain-containing protein.
   
 0.986
AZE42_03418
U3 small nucleolar RNA-associated protein 22.
   
 0.985
AZE42_04531
WD_REPEATS_REGION domain-containing protein.
   
 
 0.985
AZE42_00353
WD_REPEATS_REGION domain-containing protein.
   
 0.985
AZE42_00737
S4 RNA-binding domain-containing protein.
   
 0.983
WD40-1
WD40-1 protein.
   
 0.983
AZE42_11445
Uncharacterized protein.
   
 0.982
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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