STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_09173DUF1752 domain-containing protein. (177 aa)    
Predicted Functional Partners:
AZE42_11516
GATA-type domain-containing protein.
 
   
 0.928
AZE42_09255
Uncharacterized protein.
 
      0.900
AZE42_00738
Uncharacterized protein.
    
 0.784
AZE42_03446
MADS-box domain-containing protein.
    
 0.758
AZE42_08566
Uncharacterized protein.
    
 0.714
AZE42_00710
Uncharacterized protein.
    
  0.703
AZE42_10413
Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.694
AZE42_04993
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.694
AZE42_03761
Fork-head domain-containing protein.
    
 0.685
AZE42_01151
Serine/threonine-protein kinase TOR.
    
 
 0.634
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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