AZE42_08977 protein (Rhizopogon vesiculosus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AZE42_08977

3Beta_HSD domain-containing protein. (525 aa)

Predicted Functional Partners:

AZE42_11857

0.933

AZE42_03891

0.897

RPS1

0.871

AZE42_00883

0.863

AZE42_04347

0.862

AZE42_08385

0.862

AZE42_01042

0.861

AZE42_05040

0.855

AZE42_00094

0.849

AZE42_01270

0.848

Your Current Organism:

Rhizopogon vesiculosus

NCBI taxonomy Id: 180088
Other names: R. vesiculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AZE42_00094	AZE42_00883	A0A1J8Q6B2	A0A1J8QGQ6	Uncharacterized protein.	Uncharacterized protein.	0.999
AZE42_00094	AZE42_01042	A0A1J8Q6B2	A0A1J8PP44	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
AZE42_00094	AZE42_01270	A0A1J8Q6B2	A0A1J8RAC4	Uncharacterized protein.	KH type-2 domain-containing protein.	0.999
AZE42_00094	AZE42_08977	A0A1J8Q6B2	A0A1J8QJA9	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.849
AZE42_00094	RPS1	A0A1J8Q6B2	A0A1J8QZ80	Uncharacterized protein.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
AZE42_00883	AZE42_00094	A0A1J8QGQ6	A0A1J8Q6B2	Uncharacterized protein.	Uncharacterized protein.	0.999
AZE42_00883	AZE42_01042	A0A1J8QGQ6	A0A1J8PP44	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
AZE42_00883	AZE42_01270	A0A1J8QGQ6	A0A1J8RAC4	Uncharacterized protein.	KH type-2 domain-containing protein.	0.999
AZE42_00883	AZE42_08977	A0A1J8QGQ6	A0A1J8QJA9	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.863
AZE42_00883	RPS1	A0A1J8QGQ6	A0A1J8QZ80	Uncharacterized protein.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
AZE42_01042	AZE42_00094	A0A1J8PP44	A0A1J8Q6B2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
AZE42_01042	AZE42_00883	A0A1J8PP44	A0A1J8QGQ6	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
AZE42_01042	AZE42_01270	A0A1J8PP44	A0A1J8RAC4	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	KH type-2 domain-containing protein.	0.999
AZE42_01042	AZE42_08977	A0A1J8PP44	A0A1J8QJA9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	3Beta_HSD domain-containing protein.	0.861
AZE42_01042	RPS1	A0A1J8PP44	A0A1J8QZ80	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
AZE42_01270	AZE42_00094	A0A1J8RAC4	A0A1J8Q6B2	KH type-2 domain-containing protein.	Uncharacterized protein.	0.999
AZE42_01270	AZE42_00883	A0A1J8RAC4	A0A1J8QGQ6	KH type-2 domain-containing protein.	Uncharacterized protein.	0.999
AZE42_01270	AZE42_01042	A0A1J8RAC4	A0A1J8PP44	KH type-2 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
AZE42_01270	AZE42_08977	A0A1J8RAC4	A0A1J8QJA9	KH type-2 domain-containing protein.	3Beta_HSD domain-containing protein.	0.848
AZE42_01270	RPS1	A0A1J8RAC4	A0A1J8QZ80	KH type-2 domain-containing protein.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999

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Network Stats

number of nodes:

6

number of edges:

15

average node degree:

5

avg. local clustering coefficient:

1

expected number of edges:

13

PPI enrichment p-value:

0.115

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0022857

Transmembrane transporter activity

9 of 305

1.09

1.28

9.34e-07

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016020

Membrane

10 of 1270

0.51

0.4

0.0032

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7251

beta-Lactam resistance, and Acriflavin resistance protein

7 of 21

2.14

4.79

1.63e-11

CL:7252

beta-Lactam resistance, and MMPL family

6 of 16

2.19

4.32

5.62e-10

CL:7255

beta-Lactam resistance

5 of 10

2.32

4.04

6.63e-09

CL:7258

RND efflux pump, membrane fusion protein

4 of 5

2.52

3.58

1.39e-07

CL:7139

MacB-like periplasmic core domain, and beta-Lactam resistance

8 of 77

1.63

3.05

4.24e-10

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

gba01503

Cationic antimicrobial peptide (CAMP) resistance

5 of 22

1.97

2.99

2.54e-07

gba01501

beta-Lactam resistance

5 of 24

1.94

2.94

2.54e-07

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:1902495

Transmembrane transporter complex

8 of 19

2.24

6.08

2.00e-14

GOCC:0016020

Membrane

9 of 716

0.72

0.64

9.19e-05

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0175

Coiled coil

8 of 289

1.06

1.15

8.86e-06

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF13437

HlyD family secretion protein

6 of 10

2.39

4.82

1.78e-10

PF13533

Biotin-lipoyl like

5 of 6

2.54

4.35

3.90e-09

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR006143

RND efflux pump, membrane fusion protein

8 of 9

2.57

7.33

1.34e-15

IPR032317

RND efflux pump, membrane fusion protein, barrel-sandwich domain

6 of 7

2.55

5.25

4.89e-11

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