STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_11118WD_REPEATS_REGION domain-containing protein. (231 aa)    
Predicted Functional Partners:
AZE42_01550
HORMA domain-containing protein.
   
 0.997
AZE42_03710
WD_REPEATS_REGION domain-containing protein.
   
 0.992
AZE42_03383
Uncharacterized protein.
   
 0.991
AZE42_07180
BUB1 N-terminal domain-containing protein.
   
 0.986
AZE42_01338
WD_REPEATS_REGION domain-containing protein.
   
 0.984
AZE42_02976
TPR_REGION domain-containing protein.
   
 0.981
AZE42_08983
WD_REPEATS_REGION domain-containing protein.
   
 0.973
AZE42_02367
TPR_REGION domain-containing protein.
    
 0.971
AZE42_02726
C2H2-type domain-containing protein.
   
 
 0.962
AZE42_07629
RanBP2-type domain-containing protein.
    
 0.956
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.