STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_03659Putative_PNPOx domain-containing protein. (267 aa)    
Predicted Functional Partners:
AZE42_00252
Ipi1_N domain-containing protein.
   
 0.816
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.816
AZE42_00212
Uncharacterized protein.
   
 0.754
AZE42_11101
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.752
AZE42_03420
Uncharacterized protein.
    
 0.752
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.729
AZE42_03994
Ribosomal_L7Ae domain-containing protein.
    
  0.709
AZE42_07000
Ribosomal_L7Ae domain-containing protein.
    
  0.692
AZE42_02437
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.687
AZE42_00350
Ribosomal_L18_c domain-containing protein.
    
  0.684
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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