STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_07489Uncharacterized protein. (590 aa)    
Predicted Functional Partners:
AZE42_06836
Uncharacterized protein.
   
 
 0.988
AZE42_02380
RRM domain-containing protein.
   
 
 0.987
AZE42_00088
PUA domain-containing protein.
   
 
 0.985
AZE42_03821
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.983
AZE42_01037
Brix domain-containing protein.
   
 
 0.982
CDUP3
rRNA processing.
   
 
 0.982
AZE42_03494
Uncharacterized protein.
   
 
 0.982
AZE42_02334
Uncharacterized protein.
   
 
 0.980
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.979
AZE42_01676
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
 
 0.979
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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