STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_07179Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
AZE42_05064
Uncharacterized protein.
   
 0.787
AZE42_11597
Malate dehydrogenase.
   
 0.787
AZE42_06263
Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.
    
 0.757
AZE42_04852
Uncharacterized protein.
    
 0.755
AZE42_01474
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.750
AZE42_00294
Uncharacterized protein.
     
 0.730
AZE42_01609
Uncharacterized protein.
    
 0.676
AZE42_04819
Uncharacterized protein.
    
 0.649
AZE42_08039
Serine/threonine-protein phosphatase.
    
 0.644
AZE42_00650
WD_REPEATS_REGION domain-containing protein; Belongs to the MRE11/RAD32 family.
    
 0.631
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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