STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_03560Uncharacterized protein. (721 aa)    
Predicted Functional Partners:
AZE42_00485
Uncharacterized protein.
   
 
 0.565
AZE42_06273
Ribosomal_L18e/L15P domain-containing protein.
   
   0.563
AZE42_01875
Uncharacterized protein.
   
   0.563
AZE42_05800
Uncharacterized protein.
    
 
 0.561
AZE42_08289
Uncharacterized protein.
    
   0.561
AZE42_02337
Ribosomal_L5_C domain-containing protein.
    
 
 0.561
AZE42_09874
S4 RNA-binding domain-containing protein.
    
 
 0.560
AZE42_03263
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.558
AZE42_05328
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.558
AZE42_08799
Uncharacterized protein.
   
   0.557
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.